RESEARCH & FACULTY

RESEARCH AREAS

CARDIOVASCULAR & PULMONARY BIOLOGY

Cardiovascular and Pulmonary Biology

The cardiovascular system includes the heart and all blood vessels delivering oxygen to tissues and the transporting metabolic waste products to be cleared from the body. The pulmonary system includes the trachea (windpipe), the lungs, the muscles and bones of the rib cage, and the diaphragm. It transports oxygen to the blood and extracts carbon dioxide, along with directly interacting with external pollutants, bacteria, and viruses. Faculty study the molecular features that lead to diseased tissue and aim to leverage this information to design novel treatments and therapeutic strategies.

STRUCTURAL BIOLOGY

StructuralBiologyMany of the faculty utilize multi-omics data and molecular structure to define how and where pharmacological processes occur. Knowledge of the omics profiles from an individual allows us to define the target of pharmacologically important molecules. Defining the molecular structure of the target protein allows pharmacological mechanisms of molecules to be defined. The centers and facilities that aid in this research include the Genomics Shared Resource, Mass Spectrometry Center, Nuclear Magnetic Resonance Center, Electron Microscopy Facility, and the X-ray Crystallography Center.

SIGNAL TRANSDUCTION

Signal Transduction

How the activities of different cell types are harmonized to provide integrated responses in an organism is the key feature that allows multi-celled organisms to flourish. This coordination is achieved by the activities of a dazzling array of neurotransmitters, hormones, and growth factors, which operate on timescales of milliseconds to days. The study of these processes is known as signal transduction, or cellular signaling, which is one of the key areas of biomedical research, because of what it tells us about normal functions and the therapeutic opportunities that it identifies. The majority of faculty study cellular signaling at some level, including ion channels, signal transduction pathways, second messengers, growth factor-signaling, and the cell cycle.

CANCER BIOLOGY

Cancer BiologyFaculty are at the forefront of this research with the broad goal of developing a detailed understanding of the underlying molecular mechanisms that drive cancer cell behavior and then applying this understanding to develop better, more tailored treatments for cancer. Faculty are also members of the University of Colorado Cancer Center to translate findings into the clinic.

Specific areas of cancer biology research include the study of mechanisms of cancer drug resistance, metastasis, and tumor cell growth and death using cell biological, structural, biochemical, genetic, and systems biology approaches. Additionally, we leverage cutting-edge technologies, such as single cell multi-omic approaches and multispectral imaging to advance precision oncology.

COMPUTATIONAL BIOLOGY & PERSONALIZED MEDICINE

Computational Biology

Faculty utilize the human genome, transcriptome, proteome, metabolome, and molecular structure to define how and where pharmacological processes occur. Studying biological systems is complex and drawing statistical inferences from large compendium data of genetic factors requires novel computational methodology and compute infrastructure. Faculty are designing the methods to translate these large datasets into knowledge.

Specific areas of computational biology and personalized medicine include systems pharmacology, development of network inference methods, prediction of novel gene function, genome and transcriptome-wide association studies, machine learning and artificial intelligence, and structure modeling. Faculty also have a strong interest in the ethical concerns raised with applying artificial intelligence models and the collection of large training and testing datasets.

NEUROPHARMACOLOGY

Neuropharmacology

Faculty working in the area of neuroscience and neuropharmacology focus their research on characterizing the cellular and molecular mechanisms that underlie neuronal function and behavior. Because neuroscience/neuropharmacology is an increasingly integrative discipline, we incorporate cutting-edge multidisciplinary approaches including animal behavior, advanced microscopy, in vivo measurements of neural activity, electrophysiology, optogenetics and molecular and cell biology. One of the strengths of our faculty lies in the fact that they have experience in a number of different scientific disciplines.

Specific areas of neuropharmacology research at CU Anschutz include the study of molecular memory and synaptic plasticity, neurodegenerative diseases and molecular mechanisms that control synaptic transmission and neuromodulation. In addition, the pharmacology faculty has a particularly strong interest in the neuropharmacology of psychedelics and drugs of abuse.


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Jason Aoto PhD

Associate Professor Director, Pharmacology Program
Research Focus: Accepting Students Drugs of Abuse Neuropharmacology Optogenetics Psychiatric Disorders & Functional Imaging Signal Transduction Synaptic Signaling and Plasticity
We employ cutting-edge approaches including mouse genetics, optogenetics, viral circuit tracing, ex vivo slice electrophysiology, CRISPR/cas9 genome editing, single-cell RNA-sequencing and super-resolution microscopy to investigate how disease-relevant synaptic molecules are utilized in a cell-type- and synapse-specific manner in neural circuits implicated in neuropsychiatric disorders and addiction.

John Bankston PhD

(He/Him/His)
Associate Professor
Research Focus: Accepting Students Cardiovascular/Pulmonary/Renal/GI Physiology Cellular Physiology Ion Channels & Biophysics Macromolecular Structure
We are interested in the molecular mechanisms of cellular excitability in the heart and brain. Our focus is on two different families of ion channels, the acid-sensing ion channels (ASICs) and hyperpolarization-activated cyclic nucleotide-modulated (HCN) channels. We study the structural and physiological mechanisms of channel function for each class of channel including how these channels are regulated by other proteins as well as the lipid membrane. To do this we use a combination of patch clamp, FRET, single-molecule fluorescence, and biochemistry.

Emily Bates PhD

(She/Her/Hers)
Associate Professor, MOLB Non-Training Faculty Completed Mentor Training Course
Research Focus: Accepting Students Development Developmental Biology Developmental Neuroscience Fly Research Group Genomics Bioinformatics Motor and Cognitive Disorders Other Developmental Disorders Signal Transduction
We study how ion channel activity (bioelectricity) contributes to morphological development in multiple tissues (craniofacial structures, fly wings, brain, pancreas, and bone).

Ulli Bayer PhD

Professor
Research Focus: Accepting Students Down Syndrome & Alzheimer's Ion Channels & Biophysics Motor and Cognitive Disorders Neurobiology of Stroke Neuropharmacology Signal Transduction Synaptic Signaling and Plasticity
Our field is molecular and cellular neuroscience. Specifically, we are interested in the molecular and cellular mechanisms underlying learning, memory and cognition. We also want to know how these mechanisms go wrong in disease, and how this could be repaired by new therapeutic strategies.

Timothy Benke MD, PhD

Professor
Research Focus: Accepting Students Developmental Neuroscience Epilepsy Ion Channels & Biophysics Neuropharmacology Other Developmental Disorders Synaptic Signaling and Plasticity
My laboratory studies the function of synapses, the primary means of communication between neurons in the brain. Discoveries include mechanisms for synaptic changes that are likely associated with learning and memory. Research is directed at discovering how synapses change with development and following seizures. Our results are specifically directed to help prevent and treat the effects of early-life seizures (ELS), which can include autism, learning impairment and epilepsy.

Benjamin Bitler PhD

Associate Professor
Research Focus: Accepting Students Cancer Biology
Dr. Bitler is committed to the fight against cancer through his work to elucidate the impact of cancer-related signaling and epigenetic regulation.

Joshua Black PhD

Assistant Professor, Completed Mentor Training Course
Research Focus: Accepting Students Cancer Biology Genomics Bioinformatics
My lab studies how cells use epigenetics to control gene amplifications. We have identified epigenetic pathways that cells use to create transient increases in gene copy number. These copy number changes play roles in tumor development, progression and drug resistance. By understanding the fundamental mechanisms that govern copy number control we hope to allow better cancer therapies.

M. Cecilia Caino PhD

(she/her/hers)
Assistant Professor Facilitated and Completed Mentor Training Course
Research Focus: Accepting Students Cancer Biology Cell Biology Cellular Structure Signal Transduction
Our group aims to understand how mitochondria reprogramming in tumors impact cellular behaviors that drive progressive and lethal cancer. We use a broad repertoire of biochemistry, cell biology, live cell imaging and animal models to study the impact of mitochondria shape, number and subcellular distribution in metastatic dissemination.

Jason Christie PhD

Professor
Research Focus: Accepting Students Ion Channels & Biophysics Motor and Cognitive Disorders Neuropharmacology Optogenetics Other Systems Synaptic Signaling and Plasticity
The Christie Lab endeavors to understand the neural-circuit-mechanisms that underlie the learning-dependent optimization of behavior. The lab’s approach mainly focuses on the cerebellum, a brain region that guides adaptive updating of simple reflexive movements as well as experience-driven refinement of high-order brain function (e.g., thinking, planning, and decision making).

Mair Churchill PhD

Professor MOLB Non-Training Faculty
Research Focus: Accepting Students Chromosome Biology Gene Regulation Genomics Bioinformatics Macromolecular Structure Microbiology Virology
My lab is interested in understanding the molecular basis of essential processes that regulate gene expression. We use biophysical, biochemical methods, and structural methods, including X-ray crystallography. Our insights into these fundamental mechanisms will contribute to a better understanding and ability to regulate gene expression processes involved in human diseases and will assist in drug development efforts. Our studies focus on the following questions: (1) How is chromatin structure modulated for DNA-dependent processes? and (2) How do transcription factors and pioneering factors activate gene expression?

James Costello PhD

(he/him/his)
Associate Professor Director, Pharmacology Program
Research Focus: Accepting Students Cancer Biology Genomics Bioinformatics
Within the broad scope of systems biology, my lab focuses on 3 research areas: 1) Network inference for identifying drug targets, 2) Predicting drug sensitivity from -omics datasets, and 3) Modeling temporal effects of drug combinations.

Scott Cramer PhD

Professor
Research Focus: Accepting Students Cancer Biology Genomics Bioinformatics
Prostate Cancer Tumor Suppressors, Stem Cells, Tumor Initiating cells, Signal Transduction, Receptor Signaling.

Fabrice Dabertrand PhD

Associate Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Ion Channels & Biophysics Neurobiology of Stroke Neuropharmacology Psychiatric Disorders & Functional Imaging Signal Transduction
The control of cerebral blood flow by ion channels and calcium signaling in the pericytes, endothelial cells, and smooth muscle cells that constitute the parenchymal microcirculation, and use this information to combat brain diseases with a vascular component.

Mark Dell'Acqua PhD

Professor
Research Focus: Accepting Students Down Syndrome & Alzheimer's Ion Channels & Biophysics Motor and Cognitive Disorders Neuropharmacology Signal Transduction Synaptic Signaling and Plasticity
My laboratory’s specific research in the area of neuropharmacology focuses on understanding how cAMP and calcium second messenger signaling pathways are organized at the postsynaptic specializations of excitatory neuronal synapses.

Robert Dietz MD, PhD

Assistant Professor
Research Focus: Accepting Students Neurobiology of Stroke Neuropharmacology
Strategies for restoration of synaptic plasticity following cerebral ischemia.

David DiGregorio PhD

Visiting Professor and Chair
Research Focus: Motor and Cognitive Disorders Neuropharmacology Signal Transduction Synaptic Signaling and Plasticity
The DiGregorio laboratory studies the role of synaptic and neuronal mechanisms influencing how the brain represents time for executing precise behaviors. Projects in the lab span multiple scales (from molecules to circuits to behavior) but also across multiple disciplines (cellular and molecular neurobiology to theoretical neuroscience).

Charles Edelstein MD, PhD

Professor
Research Focus: Accepting Students Signal Transduction
Caspases and apoptosis in Polycystic kidney Disease (PKD).

Elan Eisenmesser PhD

Associate Professor
Research Focus: Accepting Students Cancer Biology Signal Transduction
The Eisenmesser lab takes a unique approach to understand protein function, and particularly enzyme function, by utilizing molecular engineering methods to control both structural interactions and the underlying movements that underlie their conformational changes. The ultimate goal of the Eisenmesser lab is to fully characterize molecular interactions at both atomic resolution and biological levels with a particular emphasis on medically relevant systems that may be exploited to either block or promote events underlying disease progression.

Patricia Ernst PhD

(she/her/hers)
Professor Completed Mentor Training Course.
Research Focus: Accepting Students Cancer Biology Gene Regulation
Our group focuses on epigenetic mechanisms regulating normal hematopoiesis and leukemia focusing on MLL-family histone methyltransferases.

Joaquin Espinosa PhD

Professor
Research Focus: Accepting Students Cancer Biology
Our main research goal is to understand how gene networks control cell behavior in homeostasis and human disease. Our two main focus areas are cancer biology and Down syndrome.

Christopher Ford PhD

Professor
Research Focus: Accepting Students Drugs of Abuse Ion Channels & Biophysics Motor and Cognitive Disorders Neuropharmacology Optogenetics Psychiatric Disorders & Functional Imaging Signal Transduction Synaptic Signaling and Plasticity
Our lab examines how neuromodulators are encoded in the mesolimbic and nigrostriatal systems and how circuit dysfunctions in these areas contribute to neurological and psychiatric disorders.

Heide Ford PhD

(she/her/hers)
Professor
Research Focus: Accepting Students Cancer Biology Gene Regulation Genomics Bioinformatics Signal Transduction
Our laboratory focuses on a specific family of homeoproteins, the Six family, and their transcriptional cofactors, Eya and Dach. The Six1 homeobox gene is overexpressed in 50% of primary breast cancers and 90% of metastatic lesions, and its overexpression.

Casey Greene PhD

Professor
Research Focus: Computational Biology Computational Biology and Personalized Medicine
The Greene lab focuses on performing open, reproducible, and inclusive research on topics at the intersection of machine learning, public data, and the transcriptome.

David Jones PhD

Associate Professor
Research Focus: Accepting Students Structural Biology
Research in my lab uses NMR spectroscopy, X-ray crystallography, molecular biology and biophysical approaches to answer the fundamental questions of how mediators of signal transduction interact with proteins of neuronal signaling pathways.

Craig Jordan PhD

(he/him/his)
Professor Completed Mentor Training Course.
Research Focus: Accepting Students Cancer Biology Developmental Biology
Dr. Jordan serves as the Chief of the Hematology Division and directs a research program focused on the development of novel therapies for the treatment of leukemia.

Matthew Kennedy PhD

Professor
Research Focus: Accepting Students Down Syndrome & Alzheimer's Neuroengineering Neuropharmacology Optogenetics Synaptic Signaling and Plasticity
We study how synapses in the central nervous system are modified by experience, with the ultimate goal of understanding how these mechanisms contribute to normal cognitive function and how they break down in various brain diseases and disorders.

Tatiana Kutateladze PhD

Professor
Research Focus: Accepting Students Cancer Biology Chromosome Biology Gene Regulation Macromolecular Structure Structural Biology
My laboratory investigates molecular mechanisms of epigenetic regulation and the role of chromatin modifications in human diseases. We use high field NMR spectroscopy and X-ray crystallography to obtain atomic-resolution structures of chromatin-binding proteins and complexes involved in transcription and DNA damage repair.

Tim Lahm MD

Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Signal Transduction
Dr. Lahm is a physician scientist in the Division of Pulmonary, Critical Care and Sleep Medicine with a focus on the study of sexual dimorphisms in lung vascular remodeling and right ventricular (RV) adaptation in pulmonary hypertension (PH).

Edward Lau PhD

Assistant Professor, Completed Mentor Training Course
Research Focus: Accepting Students Cardiovascular/Pulmonary/Renal/GI Physiology Cell Biology Cellular Physiology Genomics Bioinformatics
Our lab has a broad range of research interests, encompassing several areas of biochemistry and cell biology: Protein turnover: development and application of stable isotope labeling mass spectrometry methods to measure protein half-life Spatial proteomics: subcellular distributions of proteins, interaction between spatial and temporal protein dynamics Cellular physiology: cellular crosstalk by secretome proteins, signatures of cellular senescence, cardiotoxicity and proteostatic disruptions in induced pluripotent stem cell models Bioinformatics: correlation and discrepancies of transcript and protein levels, protein prediction with machine learning

Timothy McKinsey PhD

Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Signal Transduction
Epigenetic regulation of heart failure; signaling and transcriptional mechanisms of muscle disease.

Raphael Nemenoff PhD

Professor
Research Focus: Cancer Biology Signal Transduction
My laboratory is focused on examining molecular pathways that regulate the progression and metastasis of lung cancer.

Won Chan Oh PhD

Assistant Professor
Research Focus: Accepting Students Developmental Neuroscience Ion Channels & Biophysics Neuropharmacology Optogenetics Other Developmental Disorders Signal Transduction Synaptic Signaling and Plasticity
We use advanced optical imaging techniques to examine the spatiotemporal mechanisms that govern activity-dependent excitatory and inhibitory synaptic and circuit plasticity in the developing cortex.

Irina Petrache MD

Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology
Research interests include: Alpha 1 antitrypsin biology; Chronic Obstructive Pulmonary Disease (COPD); Lung Cell Biology; Lung Inflammation; Lung Injury and Repair; Pulmonary Vascular Disease; Regenerative Medicine; Sphingolipid signaling and metabolomics; and Vascular Biology.

J. David Port PhD

Professor
Research Focus: Cardiovascular & Pulmonary Biology Genomics Bioinformatics Signal Transduction
G-protein linked receptors and their regulation; regulation of mRNA stability.

Catherine Proenza PhD

Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Cardiovascular/Pulmonary/Renal/GI Physiology Ion Channels & Biophysics
One major focus of the lab is to understand the molecular basis for pacemaker activity within individual sinoatrial node myocytes (SAMs). To this end, we use patch clamp electrophysiology to record spontaneous action potentials and membrane currents from isolated SAMs from mice. We also use advanced patch clamp techniques like AP clamp and dynamic clamp to isolate and manipulate individual currents in SAMs.

Nidia Quillinan PhD

Associate Professor
Research Focus: Accepting Students Neurobiology of Stroke Neuropharmacology Signal Transduction Synaptic Signaling and Plasticity
The Quillinan laboratory studies excitability and plasticity changes in the brain following cerebral ischemia. We are particularly interested in cerebellar networks that are affected by stroke and cardiac arrest. We also investigate the role of sex hormones and their receptors in acute neuronal injury and longterm hippocampal function.

Laura Saba PhD

Associate Professor
Research Focus: Genomics Bioinformatics
We utilize and develop systems genetics tools to explore biological mechanisms responsible for disease.

Rebecca Schweppe PhD

(she/her/hers)
Professor Director, Cancer Biology Program
Research Focus: Accepting Students Cancer Biology Signal Transduction
The focus of my lab is to identify novel molecular targets relevant to papillary and anaplastic thyroid cancer (PTC and ATC) with the ultimate goal of advancing these studies to clinical trials for thyroid cancer patients who do not respond to standard treatment.

Natalie Serkova PhD

Professor STBB Affiliated Faculty
Research Focus: Accepting Students Neuropharmacology
Our research interests are in developing physiologically-based imaging end-points for cancer detection and response to novel anti-cancer therapies. We are also interested in developing novel molecular probes and protocols for non-invasive imaging of inflammation proteins, oncoproteins and endogenous metabolites (so-called "molecular imaging").​

Matthew Sikora PhD

(he/him/his)
Associate Professor
Research Focus: Accepting Students Cancer Biology
The overall goal of the Sikora Laboratory is to understand mechanisms of response and resistance to steroid hormones and anti-estrogen therapies in breast cancer, with a special emphasis on invasive lobular carcinoma of the breast.

Katharine Smith PhD

Associate Professor
Research Focus: Accepting Students Ion Channels & Biophysics Motor and Cognitive Disorders Neurobiology of Stroke Neuropharmacology Psychiatric Disorders & Functional Imaging Synaptic Signaling and Plasticity
Research in our lab is focused on understanding how the excitability of neurons is regulated by excitatory and inhibitory synaptic plasticity. Many neuropsychiatric diseases and brain pathologies exhibit alterations in neuronal excitability in key brain regions associated with learning and memory. Our goal is to understand the molecular mechanisms of how excitatory and inhibitory synapses function together to maintain appropriate excitability of the neuron, and how this is disrupted in diseases such as autism and schizophrenia. To reach this goal we image both excitatory and inhibitory synapses using cutting-edge microscopy, including super-resolution imaging, supported by electrophysiology and biochemical analysis.

Kunhua Song PhD

Associate Professor
Research Focus: Cardiovascular & Pulmonary Biology Cell Biology Development
The goal of research in our lab is to understand mechanisms governing cardiac lineage commitment and pathogenesis of cardiomyopathies, which forms bases to develop therapeutic strategies for heart disease. We actively collaborate with scientists in the field with the long-term goal of improving human health.

Carmen Sucharov PhD

Professor
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Cardiovascular/Pulmonary/Renal/GI Physiology
Our main goal is to identify potential new therapeutic agents for the treatment of heart failure.

Slobodan Todorovic MD, PhD

Professor
Research Focus: Accepting Students Ion Channels & Biophysics Neuropharmacology Sensory Systems Signal Transduction
The role of T-type (low-voltage-activated, LVA) calcium channels in the molecular mechanisms of anesthesia and analgesia.

Raul Torres PhD

Professor
Research Focus: Cancer Biology
We have a long-standing interest in investigating the mechanisms by which B lymphocytes develop and subsequently mount antibody responses to foreign antigens and pathogens. In the recent past we have particularly focused on understanding how the distinct B cell populations that exist in humans and mice act in concert to provide humoral immunity. To address these issues, we rely on molecular, genetic and biochemical in vitro and in vivo approaches that often rely on genetically-engineered mouse models. More recent work in our lab has revealed that a bioactive lipid, lysophosphatidic acid (LPA), is able to suppress signaling by both B and T lymphocyte antigen receptors and specifically upon engagement with the LPAR5 receptor.

Ming-Feng Tsai PhD

Assistant Professor
Research Focus: Accepting Students Ion Channels & Biophysics Signal Transduction
My research focuses on molecular mechanisms and physiological functions of transporters and ion-channels, particularly those in mitochondria. We approach questions using a wide range of tools, including membrane-biochemistry, electrophysiology, cryo-electron microscopy, animal models, and imaging.

Chandra Tucker PhD

Professor Completed Mentor Training Course.
Research Focus: Accepting Students Cellular Structure Gene Regulation Genomics Bioinformatics Signal Transduction
Research in the Tucker Lab focuses on developing new tools to sense and manipulate the intracellular environment, and using these tools to understand dynamic cellular processes. A major focus is in developing ways that we can inducibly regulate and control fundamental molecular events such as protein trafficking, proteolysis, gene expression, and intracellular signaling using inducers such as light (optogenetic tools) or chemicals.

Michael Verneris MD

Professor
Research Focus: Accepting Students Cancer Biology
My research studies are aimed at developing cellular therapy to reduce leukemia recurrence by enhancing immune recovery and by more effectively treating sites of leukemia (with a newly developed method of bone marrow irradiation).

Gregory Way PhD

Assistant Professor
Research Focus: Computational Biology
The mission of our lab is to reduce human suffering by integrating biomedical data science and software engineering into drug discovery by developing new computational methods, innovative approaches, assays, and software for analyzing high-dimensional genomic, molecular, and microscopy data with a focus on pediatric diseases, including pediatric cancer and Neurofibromatosis Type 1 (NF1).

Mary Weiser-Evans PhD

Professor Director, Integrated Physiology Program
Research Focus: Accepting Students Cardiovascular & Pulmonary Biology Cardiovascular/Pulmonary/Renal/GI Physiology Signal Transduction
Our laboratory focuses on vascular biology, with particular emphasis on smooth muscle cell (SMC) signaling and understanding the regulation of SMC phenotypic modulation in disease.

Hongjin Zheng PhD

Associate Professor
Research Focus: Accepting Students Signal Transduction Structural Biology
The biological functions of a cell are heavily influenced by its surrounding environment. This influence is achieved mostly through membrane proteins that mediate various informational exchange between the two bodies. Thus, it is vitally important to understand how these membrane proteins function, which is the overarching goal of our research. The main tools we use in the laboratory are cryo electron microscopy and X-ray crystallography.
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